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Cogent Biosciences Announces Detailed Data from APEX Pivotal Trial of Bezuclastinib in Patients with Advanced Systemic Mastocytosis at the 2026 European Hematology Association (EHA) Congress

(Positive)
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Cogent Biosciences (Nasdaq: COGT) reported detailed data from the pivotal APEX trial of bezuclastinib in advanced systemic mastocytosis (AdvSM) at EHA 2026.

Bezuclastinib showed a 65% ORR per mIWG criteria, 81% ORR per PPR criteria, strong mast cell burden reductions, durable PFS/OS, and a generally favorable safety profile. An APEX NDA filing is planned for June 2026.

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Positive

  • 65% ORR per mIWG criteria in 68 evaluable AdvSM patients
  • 81% ORR per pure pathological response criteria in 81 patients
  • 91% achieved ≥50% reduction in KIT D816V variant allele frequency
  • 89% achieved ≥50% reduction in serum tryptase and bone marrow mast cells
  • 12‑month progression‑free survival rate of 79%; overall survival 87%
  • APEX NDA submission targeted for June 2026

Negative

  • 31% incidence of neutropenia and hair color change as treatment‑related events
  • 25% thrombocytopenia and 21% ALT/AST elevations on treatment
  • Two patients experienced Grade 3 transaminase elevation; one discontinued therapy

News Market Reaction – COGT

+1.47%
+1.47% Session close to close

In the Jun 12 session, COGT gained 1.47%, reflecting a mild positive market reaction.

Data tracked by StockTitan Argus on the day of publication.

Market Context

This announcement details pivotal APEX trial results in advanced systemic mastocytosis, with ORR up ...
Analysis

This announcement details pivotal APEX trial results in advanced systemic mastocytosis, with ORR up to 81% and substantial reductions in key disease markers. It follows recent NDA progress and major conference presentations for bezuclastinib. Investors may track how these data support upcoming regulatory submissions, future label breadth, and the company’s ability to leverage its reported $866.4M cash position while managing historical net losses as commercialization approaches.

Key Figures

ORR (mIWG criteria): 65% ORR (PPR criteria): 81% 12-month PFS rate: 79% +5 more
8 metrics
ORR (mIWG criteria) 65% APEX AdvSM primary endpoint (CR+CRh+PR+CI) in 68 evaluable patients
ORR (PPR criteria) 81% APEX AdvSM key secondary endpoint in 81 patients
12-month PFS rate 79% APEX AdvSM durability outcome at 12 months
12-month OS rate 87% APEX AdvSM overall survival at 12 months
Patients treated 81 patients AdvSM patients in APEX Part 2 on 150 mg bezuclastinib
Serum tryptase reduction 89% Proportion with ≥50% reduction in serum tryptase (n=80)
Bone marrow mast cell reduction 89% Proportion with ≥50% reduction or clearance of aggregates (n=80)
KIT D816V VAF reduction 91% Proportion with ≥50% reduction in KIT D816V variant allele frequency (n=43)

Historical Context

5 past events · Latest: May 28 (Positive)
Pattern 5 events
Date Event Sentiment 24h Move Catalyst
May 28 NDA acceptance GIST Positive +2.5% FDA accepted NDA with Priority Review for bezuclastinib plus sunitinib in GIST.
May 27 Conference participation Positive +1.7% Jefferies conference appearance and equity inducement grants for new employees.
May 12 EHA data preview Positive +1.3% Announcement of multiple EHA 2026 presentations including pivotal APEX AdvSM data.
May 05 Q1 2026 earnings Negative +0.7% Reported wider quarterly loss alongside strong cash balance and pipeline progress.
Apr 21 PEAK trial at ASCO Positive -0.7% Positive Phase 3 PEAK GIST data selected for oral presentation at ASCO.

24h Move is the share-price change in the day after each event; other market factors may also have contributed.

Pattern Detected

Recent positive clinical and regulatory milestones have usually been followed by modest share gains, with occasional divergences on major data or financial updates.

Recent Company History

Over the past few months, Cogent has reported several milestones centered on bezuclastinib. These include FDA NDA acceptance with Priority Review for GIST, multiple major conference presentations at ASCO and EHA 2026, and Q1 2026 results highlighting a net loss of $97.4M but cash of $866.4M. Most clinical and regulatory announcements saw positive price reactions, while some key trial and earnings updates showed brief divergences between news tone and price.

Key Terms

objective response rate, variant allele frequency, progression-free survival, overall survival, +3 more
7 terms
objective response rate clinical
"updated objective response rate (CR+CRh+PR+CI) of 65% per mIWG criteria"
The objective response rate (ORR) is the percentage of patients in a clinical trial whose tumors measurably shrink or disappear according to preset rules. Investors use it as a quick, objective signal of a drug’s ability to produce a clear treatment effect—like counting how many plants visibly respond after applying a new fertilizer—and higher ORR can improve odds of regulatory approval, commercial success, and company valuation.
variant allele frequency medical
"91% of patients achieving ≥50% reduction in variant allele frequency"
Variant allele frequency is the proportion of DNA molecules in a sample that carry a specific genetic change, usually measured by sequencing and expressed as a percentage. Think of it as the share of colored marbles in a jar: a higher share means the mutation is more common in the measured tissue or virus. For investors, VAF matters because it helps assess how strongly a mutation drives disease, how likely a targeted therapy will work, and whether resistance or diagnostic tests will be commercially relevant.
progression-free survival clinical
"prolonged PFS with a 12-month PFS rate of 79%"
Progression-free survival is the length of time during and after a treatment that a patient's disease does not get worse, measured from the start of treatment until the disease shows measurable signs of progression or the patient dies. Investors care because longer progression-free survival in clinical trials often signals that a drug is effective, improving chances of regulatory approval, market adoption, and revenue potential—think of it as a stopwatch showing how long a therapy can keep the illness at bay.
overall survival clinical
"a 12-month OS rate of 87%"
Overall survival is the average or median length of time patients remain alive after starting a treatment or entering a clinical study, measured regardless of cause of death. Investors care because it is a clear, hard measure of a therapy’s real-world benefit — like timing how long a new battery actually runs — and strong improvements in overall survival can drive regulatory approval, market adoption and revenue potential.
new drug application regulatory
"APEX NDA to be submitted in June 2026"
A new drug application is a formal request submitted to government regulators seeking approval to market a new medicine. It is like a detailed proposal that shows the drug has been tested for safety and effectiveness. For investors, receiving approval signals that the drug may soon become available for sale, potentially leading to revenue growth and impacting the company's value.
expanded access programs regulatory
"established active Expanded Access Programs (EAPs) for U.S. patients"
Expanded access programs let patients who are seriously ill and ineligible for clinical trials receive an investigational drug or therapy outside the trial system, often when no approved treatment exists. For investors, these programs matter because they can provide early real-world use that affects demand, public perception, regulatory scrutiny and safety data—like letting a handful of customers test a prototype product before full market approval, with both potential upside and risk.

AI-generated analysis. How Rhea-AI works. Not financial advice.

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-- Bezuclastinib demonstrated rapid and deep clinical benefit in AdvSM patients resulting in an updated objective response rate (CR+CRh+PR+CI) of 65% per mIWG criteria and 81% ORR per PPR criteria –

-- Bezuclastinib demonstrated a powerful effect on mast cell burden with 91% of patients achieving 50% reduction in variant allele frequency and 89% of patients achieving ≥50% reduction in bone marrow mast cells or clearance of aggregates

-- Bezuclastinib continues to demonstrate a favorable safety and tolerability profile –

-- APEX NDA to be submitted in June 2026 –

WALTHAM, Mass. and BOULDER, Colo., June 12, 2026 (GLOBE NEWSWIRE) -- Cogent Biosciences, Inc. (Nasdaq: COGT), a biotechnology company focused on developing precision therapies for genetically defined diseases, today announced detailed and updated clinical results from the registration-directed APEX clinical trial of bezuclastinib in patients with advanced systemic mastocytosis (AdvSM) demonstrating clinically meaningful results as measured by consensus criteria used to assess patient response. The company also shared a more detailed review of the pathobiology data in AdvSM patients from the APEX trial, reinforcing the rapid and deep clinical benefit bezuclastinib has demonstrated in these patients. The data will be presented at the 2026 European Hematology Association (EHA) Congress taking place in Stockholm, Sweden, June 11-14, 2026.

“We are excited to share updated and detailed results from the APEX trial in AdvSM patients, building upon previously announced results from bezuclastinib in the SUMMIT trial in NonAdvSM patients,” said Andrew Robbins, Cogent’s President and Chief Executive Officer. “The results shown across these two trials demonstrate that a selective, potent KIT D816V inhibitor like bezuclastinib will have tremendous opportunity to become the new standard of care and change the lives of patients living with systemic mastocytosis. We are on track to complete the APEX NDA submission in the very near future and plan to launch bezuclastinib later this year in both systemic mastocytosis and GIST following FDA approval.”

As of the updated data cutoff of March 31, 2026 in Part 2 of the APEX trial, 81 AdvSM patients were treated with 150 mg of bezuclastinib, including 57 patients with SM-AHN, 11 patients with ASM and 13 patients with MCL. The primary endpoint of response per mIWG-MRT-ECNM was assessed on 68 evaluable patients and showed 65% ORR (CR+CRh+PR+CI), including 57% of patients who achieved CR, CRh or PR as best response.

Additional highlights include:

  • Key secondary endpoint of response per pure pathological response (PPR) criteria was assessed on 81 patients which showed an 81% ORR (CR+CRh+PR).
  • Bezuclastinib demonstrated reversal of bone marrow pathobiology including rapid and deep reductions in aberrant CD25 and CD30 expression, normalization of mast cell morphology, normalization of bone marrow cellularity, and improvement in myelofibrosis.
  • Bezuclastinib demonstrated durable clinical activity and prolonged PFS with a 12-month PFS rate of 79% and a 12-month OS rate of 87%. Median duration of PFS and OS were immature at the time of the data cutoff.
  • Bezuclastinib achieved clear and clinically significant reductions in objective disease markers for these AdvSM patients:
Outcome measure Bezuclastinib 
Proportion with ≥50% reduction in serum tryptase (n=80)89%
Proportion with ≥50% reduction in bone marrow mast cells or clearance of aggregates (n=80)89%
Proportion with ≥50% reduction in KIT D816V variant allele frequency (n=43)91%
   

“The results from the APEX trial demonstrate clear evidence of bezuclastinib’s rapid and deep clinical activity in patients with advanced systemic mastocytosis,” said Daniel J. DeAngelo, M.D., Ph.D., Chief of the Division of Leukemia at the Dana-Farber Cancer Institute and Professor of Medicine, Harvard Medical School. "Coupled with an impressive safety and tolerability profile minimizing off-target toxicities that allows for long-term therapeutic dosing, bezuclastinib will become an important treatment option for patients with advanced SM.”

Pathobiology Data

Cogent will also present new data highlighting the impact bezuclastinib has at a cellular level in patients with AdvSM. In the APEX study, bezuclastinib demonstrated robust improvement in disease pathology, with effects observed as early as eight weeks, including high PPR rates, improvement (including normalization) in bone marrow mast cell distribution, improvement in broader bone marrow characteristics and a majority of patients achieving normalization of serum tryptase. In addition, approximately one-third of patients treated with bezuclastinib achieved undetectable levels of KIT D816V VAF, signifying modification of the underlying AdvSM disease with bezuclastinib treatment.

APEX Safety and Tolerability

As of the data cutoff, bezuclastinib continued to be well-tolerated, with infrequent need for dose reduction or discontinuation for treatment-related adverse events (TRAEs). The most frequent TRAEs reported on bezuclastinib treatment were hair color change (31%), neutropenia (31%), altered taste (28%), thrombocytopenia (25%), and ALT/AST elevations (21%). The majority of transaminase elevations were of low grade, asymptomatic and reversible. Of the two patients who experienced Grade 3 transaminase elevation, one discontinued treatment and one remains on therapy following dose reduction.

The EHA posters and presentation will be available on the Cogent website at: https://www.cogentbio.com/pipeline-publications/#posters-publications

Bezuclastinib - Expanded Access Program

Working with the FDA, Cogent has established active Expanded Access Programs (EAPs) for U.S. patients SM or GIST who meet disease-specific criteria and could benefit from treatment with bezuclastinib or the combination of bezuclastinib and sunitinib. For more information please visit: https://www.cogentbio.com/bezuclastinib-program-development/#our-expanded-access-policy

About Cogent Biosciences, Inc.
Cogent Biosciences is a biotechnology company focused on developing precision therapies for genetically defined diseases. The most advanced clinical program, bezuclastinib, is a selective tyrosine kinase inhibitor that is designed to potently inhibit the KIT D816V mutation as well as other mutations in KIT exon 17. KIT D816V is responsible for driving systemic mastocytosis, a serious disease caused by unchecked proliferation of mast cells. Exon 17 mutations are also found in patients with advanced gastrointestinal stromal tumors (GIST), a type of cancer with strong dependence on oncogenic KIT signaling. In addition, the Cogent Research Team is developing a portfolio of novel targeted therapies to help patients fighting serious, genetically driven diseases targeting mutations in ErbB2, PI3Kα, KRAS and JAK2. Cogent Biosciences is based in Waltham, MA and Boulder, CO. Visit our website for more information at www.cogentbio.com. Follow Cogent Biosciences on social media: X and LinkedIn. Information that may be important to investors will be routinely posted on our website and X.

Forward Looking Statements
This press release contains forward-looking statements within the meaning of the Private Securities Litigation Reform Act of 1995, including, but not limited to, statements regarding: the company’s plans to submit an IND for bezuclastinib in AdvSM in June 2026; the expectation that bezuclastinib will become the new standard of care and change the lives of patients living with systemic mastocytosis; the company’s plans to launch bezuclastinib commercially later this year in both systemic mastocytosis and GIST following FDA approval; and the expectation that bezuclastinib will become an important treatment option for patients with AdvSM. The use of words such as, but not limited to, "anticipate," "believe," "continue," "could," "estimate," "expect," "intend," "may," "might," "plan," "potential," "predict," "project," "should," "target," "will," or "would" and similar words expressions are intended to identify forward-looking statements. Forward-looking statements are neither historical facts nor assurances of future performance. Instead, they are based on our current beliefs, expectations and assumptions regarding the future of our business, future plans and strategies, our clinical results, the rate of enrollment in our clinical trials and other future conditions. New risks and uncertainties may emerge from time to time, and it is not possible to predict all risks and uncertainties. No representations or warranties (expressed or implied) are made about the accuracy of any such forward-looking statements. We may not actually achieve the forecasts or milestones disclosed in our forward-looking statements, and you should not place undue reliance on our forward-looking statements. Such forward-looking statements are subject to a number of material risks and uncertainties including but not limited to those set forth under the caption "Risk Factors" in Cogent's most recent Annual Report on Form 10-K, as supplemented by Quarterly Reports on Form 10-Q and other filings Cogent makes with the SEC from time to time . Any forward-looking statement speaks only as of the date on which it was made. Neither we, nor our affiliates, advisors or representatives, undertake any obligation to publicly update or revise any forward-looking statement, whether as a result of new information, future events or otherwise, except as required by law. These forward-looking statements should not be relied upon as representing our views as of any date subsequent to the date hereof.



Contact:
Christi Waarich
Senior Director, Investor Relations
christi.waarich@cogentbio.com
617-830-1653

FAQ

What did Cogent Biosciences (COGT) report from the APEX AdvSM trial at EHA 2026?

Cogent Biosciences reported that bezuclastinib produced notable response rates and biomarker reductions in advanced systemic mastocytosis. According to Cogent Biosciences, objective response rate reached 65% per mIWG criteria and 81% per pure pathological response criteria, with strong reductions in mast cell–related disease markers.

What were the objective response rates for bezuclastinib in AdvSM patients in APEX (COGT)?

Bezuclastinib achieved a 65% overall response rate per mIWG criteria and 81% per pure pathological response criteria. According to Cogent Biosciences, 57% of patients reached complete, complete with partial hematologic, or partial response as best response, demonstrating substantial clinical activity in advanced systemic mastocytosis.

How did bezuclastinib affect mast cell burden and biomarkers in the APEX trial for COGT?

Bezuclastinib led to large reductions in mast cell–related disease markers in AdvSM patients. According to Cogent Biosciences, 89% had ≥50% serum tryptase reduction, 89% had ≥50% bone marrow mast cell reduction or aggregate clearance, and 91% showed ≥50% KIT D816V variant allele frequency reduction.

What progression-free and overall survival outcomes were reported for bezuclastinib in AdvSM (COGT)?

Bezuclastinib showed encouraging 12‑month progression-free and overall survival rates in the APEX trial. According to Cogent Biosciences, the 12‑month PFS rate was 79% and the 12‑month OS rate was 87%, with median PFS and OS not yet mature at cutoff.

What safety and tolerability findings were observed with bezuclastinib in the APEX AdvSM trial (COGT)?

Bezuclastinib was generally well-tolerated with mostly manageable treatment-related events. According to Cogent Biosciences, common TRAEs included hair color change (31%), neutropenia (31%), altered taste (28%), thrombocytopenia (25%) and ALT/AST elevations (21%), mostly low-grade, asymptomatic and reversible, with two Grade 3 transaminase cases.

When does Cogent Biosciences (COGT) plan to submit the APEX NDA for bezuclastinib?

Cogent Biosciences plans to submit the APEX NDA for bezuclastinib in June 2026. According to Cogent Biosciences, the company is on track with the registration-directed APEX data package to support potential approval in advanced systemic mastocytosis.

Does Cogent Biosciences (COGT) offer expanded access to bezuclastinib for SM or GIST patients?

Cogent Biosciences has established active expanded access programs for eligible U.S. SM and GIST patients. According to Cogent Biosciences, these programs provide access to bezuclastinib or bezuclastinib plus sunitinib for patients meeting disease-specific criteria who may benefit from treatment.